... | @@ -4,28 +4,24 @@ GEPARD - Gepard-Enabled PARticle Detection for Raman microscopes. |
... | @@ -4,28 +4,24 @@ GEPARD - Gepard-Enabled PARticle Detection for Raman microscopes. |
|
Copyright (C) 2018 Lars Bittrich and Josef Brandt, Leibniz-Institut für
|
|
Copyright (C) 2018 Lars Bittrich and Josef Brandt, Leibniz-Institut für
|
|
Polymerforschung Dresden e. V. [bittrich-lars@ipfdd.de](mailto:bittrich-lars@ipfdd.de)
|
|
Polymerforschung Dresden e. V. [bittrich-lars@ipfdd.de](mailto:bittrich-lars@ipfdd.de)
|
|
|
|
|
|
Requirements:
|
|
|
|
=============
|
|
Requirements
|
|
|
|
============
|
|
|
|
|
|
- python >=3.6, PyQt5, OpenCV >=3.4.1, numpy >=1.14, scikit-image >=0.13.1, scipy >=1.1.0,
|
|
- python >=3.6, PyQt5, OpenCV >=3.4.1, numpy >=1.14, scikit-image >=0.13.1, scipy >=1.1.0,
|
|
win32com, pythoncom, cython 0.28
|
|
win32com, pythoncom, cython 0.28
|
|
- we advise the use of Anaconda (python 3.7): https://www.anaconda.com/download
|
|
- We advise the use of Anaconda (python 3.7): https://www.anaconda.com/download
|
|
this package contains most of the python libraries
|
|
as it contains most of the python libraries. However, following packages need to be installed manually: opencv-python, scikit-image, dill
|
|
however, some required packages are missing.
|
|
- We recommend working with a 64bit OS and also a python interpreter compiled
|
|
Start anaconda prompt and install additional packages:
|
|
for 64bit as many use cases require a lot of memory (32 GB
|
|
```
|
|
recommended).
|
|
pip install opencv-python
|
|
- The tsp module in externalmodules can be built with:
|
|
conda install scikit-image dill
|
|
|
|
```
|
|
|
|
- we recommend working with a 64bit OS and also a python interpreter compiled
|
|
|
|
for 64bit as many use cases require a lot of memory (16 GB better 32 GB
|
|
|
|
recommended)
|
|
|
|
- the tsp module in externalmodules can be built with
|
|
|
|
```
|
|
```
|
|
python setuptsp.py
|
|
python setuptsp.py
|
|
```
|
|
```
|
|
please note: for this step a valid compiler needs to be installed in the
|
|
Please note: for this step a valid compiler needs to be installed in the
|
|
system; Otherwise use the precompiled tsp-module
|
|
system; otherwise use a pre-compiled tsp-module.
|
|
|
|
|
|
If you plan on using the WITec Raman interface to control your device, please
|
|
If you plan on using the WITec Raman interface to control your device, please
|
|
note: You use this interface at your OWN RISK! Make sure, that no obstacles
|
|
note: You use this interface at your OWN RISK! Make sure, that no obstacles
|
|
block the objective and that you UNDERSTAND and VALIDATE the code, that controls
|
|
block the objective and that you UNDERSTAND and VALIDATE the code, that controls
|
... | @@ -42,6 +38,11 @@ It is possible to create a windows link file, that executes python with the |
... | @@ -42,6 +38,11 @@ It is possible to create a windows link file, that executes python with the |
|
gepard script as an argument and the working directory pointing to the folder
|
|
gepard script as an argument and the working directory pointing to the folder
|
|
containing the gepard module for convenience.
|
|
containing the gepard module for convenience.
|
|
|
|
|
|
|
|
Installation guide
|
|
|
|
==================
|
|
|
|
|
|
|
|
A step by step installation guide can be found [here](Step by step installation guide).
|
|
|
|
|
|
|
|
|
|
Working Principle
|
|
Working Principle
|
|
=================
|
|
=================
|
... | | ... | |